| All functions | |
|---|---|
| Efficiently edit rows of model code generated from nimble | |
| Discretize traps and initial activity centers | |
| Retrieve nimbleCode for spatial capture-recapture models | |
| Retrieve nimbleCode for discrete spatial capture-recapture models | |
| Retrieve nimbleCode for spatial count models | |
| Define state-space for spatial capture-recapture models | |
| Generate starting locations for activity centers | |
| Prepare classic SCR data components for local modeling approach | |
| Create habitat mask matrix or array from polygon | |
| Create habitat mask matrix or array from raster | |
| Summarize MCMC chain output from nimble | |
| Display row indices for model used in 'nimble' | |
| Generate realized density surface from MCMC output | |
| Rescale trap coordinates, grid extent, and starting activity center coordinates | |
| Rescale trap coordinates, individual-level grid extent, and starting activity center coordinates for local SCR approach | |
| Run spatial capture-recapture models in nimble using parallel processing | |
| Run discrete spatial capture-recapture models in 'nimble' using parallel processing | |
| Simulate basic spatial capture-recapture data | |